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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824475.1_cds_XP_016501905.1_15599
CDS Infomation

[gene=LOC107820191] [db_xref=GeneID:107820191] [protein=probable pectate lyase 16] [protein_id=XP_016501905.1] [location=complement(join(14595..14816,15010..15148,15276..15379,15602..16336))] [gbkey=CDS]
Sequence

ATGGCAAAATCAACTTCCTTCCAACTACTTTCATGGCTTCTAATATGTTCAGTTTCTACC
GTAGTAGCTAGTAAACTAAGTCATGAACATGAAACTAAAGCTGTAGATGATTATCTTCCA
AGTTATTATCCTCAGCCTCACAAAAACCTCCTTAATGTCATCGATTCGTGCTGGAGATTG
AACCACGATTGGTCATCCAATCGCAAGGCTTTAGCAGATTGTGCAATAGGCTTTGGAAGT
AATGCTATAGGAGGTAAATATGGTGACATTTACGTGGTCACTGACCCTTCTGATGATCCT
GCAAATCCTGAACCAGGCACTCTTAGGTATGGCGTTATTCAGTCCGAGCCACTTTGGATC
ATTTTCAAAAGGGATATGGTACTTACACTTAAGAATGAGCTTATGGTCAATAGTCACAAG
ACTATAGACGGCAGAGGTGCAAAAGTTGAGATTTCTAATGGTCCATGCATTACATTGGAC
TATGTTACAAATGTTATTATTCATGGGATTAGTATCCATGATTGTAAGCCTGGTAAAAAA
GGGATGGTTCGTAGTAGTCCTGAACATGTTGGTGAAAGATTAGGCTCTGATGGTGATGCC
ATAAGTGTGTTTGGTTCGTTGAATGTTTGGATTGATCATTGTTATCTTGCCCGTGCAACG
GATGGCCTACTCGATGTTATTCATGCTTCAACTGCAGTAACTATCTCCAACAATTACTTC
ACTGAGCATGACAAAGTCATGTTGTTGGGGCACAATGATCAATATACTGCAGACAGAAGC
ATGAAAGTCACAGTAGTATTCAACCATTTTGGCCGTGAACTAGTTCAAAGGATGCCAAGG
GTTAGATATGGTTATGCTCATGTGGCCAATAATTATTATGATCAATGGTTAATGTATGCC
ATTGGTGGGAGTGCAGATCCAACAATATTCAGTGAGGGAAATTATTTCATTGCTCCTGAC
AAAGCTTACAACAAAGAGGTCACTAAGAGGGAGACTGAAGAAAAAGGATGGAAGAGTTGG
AAATGGAGGTCTTCCAAGGATGTGTTTTTGAATGGAGCATATTTTAATCCATCTGGATAT
GGAAGTATTGCTCCAAAATACACAAGAGGACAATCGTTTATTGTTGCTCAAGGATCGTTA
ACTCCCTCTTTAACTTCTGATGCTGGTCCTCTTCAATGTGTTGTCAATGAACCTTGCTAA

Peptide Sequence

PEP ID

XP_016501905.1
PEP Infomation

PREDICTED: probable pectate lyase 16 [Nicotiana tabacum]
Sequence

MAKSTSFQLLSWLLICSVSTVVASKLSHEHETKAVDDYLPSYYPQPHKNLLNVIDSCWRL
NHDWSSNRKALADCAIGFGSNAIGGKYGDIYVVTDPSDDPANPEPGTLRYGVIQSEPLWI
IFKRDMVLTLKNELMVNSHKTIDGRGAKVEISNGPCITLDYVTNVIIHGISIHDCKPGKK
GMVRSSPEHVGERLGSDGDAISVFGSLNVWIDHCYLARATDGLLDVIHASTAVTISNNYF
TEHDKVMLLGHNDQYTADRSMKVTVVFNHFGRELVQRMPRVRYGYAHVANNYYDQWLMYA
IGGSADPTIFSEGNYFIAPDKAYNKEVTKRETEEKGWKSWKWRSSKDVFLNGAYFNPSGY
GSIAPKYTRGQSFIVAQGSLTPSLTSDAGPLQCVVNEPC

Transcript Sequence

Gene sequence data has not been registered.